Expertomica ECell

The software is designed for manual time-lapse microscopy image series of cell monolayer labeling


This work was supported and co-financed by the South Bohemian Research Center of Aquaculture and Biodiversity of Hydrocenoses (CZ.1.05/2.1.00/01.0024).

Description

The software is designed for manual time-lapse microscopy image series of cell monolayer labeling. The software brings fast and efficient way for cell cycle analysis of cell monolayer. Many statistics can outcomes from the labeling – cell cycle duration, comparison of cell states, cell cycle vocabulary. User cell state vocabulary can be created for any individual type of objects. More information can be found in video guide.

Input Data

Directory with time-lapse microscopy image series of cell monolayer. The vocabulary with definition of the cell states.

Output

Txt files with labeled objects. Cell pedigree for all cells in the monolayer. The statistics about – cell states (can be uploaded into Microsoft Excel).

Installation

Download and run Expertomica ECell.exe and follow the instructions. The software will be installed into selected directory.

The installation contains:
Expertomica ECell.exe – the software
Help-Expertomica ECell.pdf – help
Testing data – folder with testing data
CellCycleVocabulary – contains the vocabulary of the cell states
VideoGuide – contains video guide for the software

Requirements

Operation system: Windows XP, Vista 32bits and Windows 7 32bits

Testing

The directory “Testing data” contains the labeled cell monolayer. Just select the file located in Testing data\project in Menu-project-load project and you can test the software.

Download

Expertomica ECell - Software (204.0 MB)

Mirror #1 - SpeedyShare.com Mirror #2 - Uloz.to

Author

Císař, Štys